Line |
Branch |
Exec |
Source |
1 |
|
|
// ______ ______ _ _ _____ ______ |
2 |
|
|
// | ____| ____| | (_)/ ____| | ____| |
3 |
|
|
// | |__ | |__ | | _| (___ ___| |__ |
4 |
|
|
// | __| | __| | | | |\___ \ / __| __| |
5 |
|
|
// | | | |____| |____| |____) | (__| |____ |
6 |
|
|
// |_| |______|______|_|_____/ \___|______| |
7 |
|
|
// Finite Elements for Life Sciences and Engineering |
8 |
|
|
// |
9 |
|
|
// License: LGL2.1 License |
10 |
|
|
// FELiScE default license: LICENSE in root folder |
11 |
|
|
// |
12 |
|
|
// Main authors: C. Corrado |
13 |
|
|
// |
14 |
|
|
|
15 |
|
|
#ifndef _FHNSOLVER_HPP |
16 |
|
|
#define _FHNSOLVER_HPP |
17 |
|
|
|
18 |
|
|
// System includes |
19 |
|
|
|
20 |
|
|
// External includes |
21 |
|
|
|
22 |
|
|
// Project includes |
23 |
|
|
#include "Solver/ionicSolver.hpp" |
24 |
|
|
#include "Solver/cardiacFunction.hpp" |
25 |
|
|
|
26 |
|
|
/*! |
27 |
|
|
\class FhNSolver |
28 |
|
|
\brief Fitzhugh Nagumo Ionic model |
29 |
|
|
|
30 |
|
|
\c FhNSolver is the class implementing the Fitzhugh Nagumo Ionic model: |
31 |
|
|
|
32 |
|
|
\c dw/dt = eps * (u*gamma - beta*w), w(t=0) = 0 |
33 |
|
|
|
34 |
|
|
\c I_{ion} = f_0 * u * (u-alpha) * (1-u) - w |
35 |
|
|
|
36 |
|
|
\c This class inherits from ionicSolver |
37 |
|
|
|
38 |
|
|
\author Cesare Corrado |
39 |
|
|
*/ |
40 |
|
|
|
41 |
|
|
|
42 |
|
|
namespace felisce { |
43 |
|
|
class FhNSolver: |
44 |
|
|
public IonicSolver { |
45 |
|
|
public: |
46 |
|
|
//!Constructor. |
47 |
|
|
FhNSolver(FelisceTransient::Pointer fstransient); |
48 |
|
|
//!Destructor. |
49 |
|
|
~FhNSolver() override; |
50 |
|
|
//!Compute RHS in EDO. |
51 |
|
|
void computeRHS() override; |
52 |
|
|
//!Solve the EDO. |
53 |
|
|
void solveEDO() override; |
54 |
|
|
//!Computation of ionic current from EDO solution. |
55 |
|
|
void computeIon() override; |
56 |
|
|
|
57 |
|
|
|
58 |
|
|
// functor and acces to variable properties fhn |
59 |
|
|
|
60 |
|
|
inline const std::vector<double>& f0Par() const { |
61 |
|
|
return m_f0Par; |
62 |
|
|
} |
63 |
|
✗ |
inline std::vector<double>& f0Par() { |
64 |
|
✗ |
return m_f0Par; |
65 |
|
|
} |
66 |
|
|
|
67 |
|
✗ |
virtual inline const HeteroSparFHN& fctSpar() const { |
68 |
|
✗ |
return m_heteroSpar; |
69 |
|
|
} |
70 |
|
✗ |
virtual inline HeteroSparFHN& fctSpar() { |
71 |
|
✗ |
return m_heteroSpar; |
72 |
|
|
} |
73 |
|
|
|
74 |
|
|
protected: |
75 |
|
|
HeteroSparFHN m_heteroSpar; |
76 |
|
|
std::vector<double> m_f0Par; |
77 |
|
|
|
78 |
|
|
}; |
79 |
|
|
} |
80 |
|
|
|
81 |
|
|
#endif |
82 |
|
|
|